Rcsb.org / DDC
Domain overview in DDC niche. Based on relevant links and pages only.
| rcsb.org rank 123 |
| Number of domains linking to rcsb.org 5 | semantic flow 0.59 |
| Number of links to rcsb.org 167 | semantic flow 0.59 |
| Number of domains linked from rcsb.org 22 | semantic flow 2.29 |
| Number of links from rcsb.org 121 | semantic flow 2.29 |
Popular pages pointing to rcsb.org
Pages with highest topical PageRank pointing to domain.
Popular pages from rcsb.org
On-topic pages from domain with highest topical PageRank.
| title / url |  | | | | | | | | |
|---|---|---|---|---|---|---|---|---|---|
| PDB-101: Geis Archive: Reprint Request http://pdb101.rcsb.org/geis-archive/reprint-request/geis-0316-transfer-rna  | 0.28 | 0.79 | 39 | 6 | 0 | 0 | 0 | 0 | |
| PDB-101: Geis Archive: Reprint Request http://pdb101.rcsb.org/geis-archive/reprint-request/geis-0543-a-dna | 0.28 | 0.82 | 39 | 6 | 0 | 0 | 0 | 0 | |
| RCSB PDB - 2HMI: HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEX Structure Summary Page http://www.rcsb.org/pdb/explore/explore.do?structureId=2hmi | 0.28 | 0.66 | 131 | 50 | 6 | 4 | 0 | 0 | |
| PDB-101: Diabetes at a Molecular Level http://pdb101.rcsb.org/teach/diabetes-at-a-molecular-level | 0.28 | 0.76 | 60 | 6 | 0 | 0 | 0 | 0 | |
| RCSB PDB - 1K83: Crystal Structure of Yeast RNA Polymerase II Complexed with the Inhibitor Alpha Amanitin Structure Summary http://www.rcsb.org/pdb/explore/explore.do?structureId=1k83 | 0.28 | 0.76 | 192 | 64 | 8 | 5 | 0 | 0 | |
| RCSB PDB - 1ZPQ: STRUCTURE OF BACTERIOPHAGE LAMBDA CII protein Structure Summary Page http://www.rcsb.org/pdb/explore.do?structureId=1zpq | 0.21 | 0.8 | 133 | 51 | 5 | 3 | 0 | 0 | |
| RCSB PDB - 1SL2: Ternary 5' complex of T7 DNA polymerase with a DNA primer/template containing a cis-syn thymine dimer on the template and http://www.rcsb.org/pdb/explore/explore.do?structureId=1sl2 | 0.21 | 0.85 | 164 | 62 | 10 | 6 | 0 | 0 | |
| RCSB PDB - 3GBI: The Rational Design and Structural Analysis of a Self-Assembled Three-Dimensional DNA Crystal Structure Summary http://www.rcsb.org/pdb/explore/explore.do?structureId=3gbi | 0.21 | 0.76 | 117 | 44 | 5 | 3 | 0 | 0 | |
| RCSB PDB - 1RYS: REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION Structure Summary Page http://www.rcsb.org/pdb/explore/explore.do?structureId=1rys | 0.21 | 0.84 | 175 | 62 | 7 | 5 | 0 | 0 | |
| RCSB PDB - 1UL1: Crystal structure of the human FEN1-PCNA complex Structure Summary Page http://www.rcsb.org/pdb/explore/explore.do?structureId=1ul1 | 0.21 | 0.8 | 153 | 55 | 7 | 5 | 0 | 0 |
Popular prospect pages from rcsb.org
On-topic pages from domain with highest topical PageRank having a few outgoing links and domains.
| title / url | | | | | | | | | |
|---|---|---|---|---|---|---|---|---|---|
| RCSB PDB - 2HMI: HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEX Structure Summary Page http://www.rcsb.org/pdb/explore/explore.do?structureId=2hmi | 0.28 | 0.66 | 131 | 50 | 6 | 4 | 0 | 0 | |
| RCSB PDB - 1K83: Crystal Structure of Yeast RNA Polymerase II Complexed with the Inhibitor Alpha Amanitin Structure Summary http://www.rcsb.org/pdb/explore/explore.do?structureId=1k83 | 0.28 | 0.76 | 192 | 64 | 8 | 5 | 0 | 0 | |
| RCSB PDB - 1RYS: REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION Structure Summary Page http://www.rcsb.org/pdb/explore/explore.do?structureId=1rys | 0.21 | 0.84 | 175 | 62 | 7 | 5 | 0 | 0 | |
| RCSB PDB - 1UL1: Crystal structure of the human FEN1-PCNA complex Structure Summary Page http://www.rcsb.org/pdb/explore/explore.do?structureId=1ul1 | 0.21 | 0.8 | 153 | 55 | 7 | 5 | 0 | 0 | |
| RCSB PDB - 3U5Z: Structure of T4 Bacteriophage clamp loader bound to the T4 clamp, primer-template DNA, and ATP analog Structure Summary http://www.rcsb.org/pdb/explore/explore.do?structureId=3u5z | 0.21 | 0.9 | 171 | 67 | 9 | 5 | 0 | 0 | |
| RCSB PDB - 1SL2: Ternary 5' complex of T7 DNA polymerase with a DNA primer/template containing a cis-syn thymine dimer on the template and http://www.rcsb.org/pdb/explore/explore.do?structureId=1sl2 | 0.21 | 0.85 | 164 | 62 | 10 | 6 | 0 | 0 |
Domains with most semantic flow to rcsb.org
Relevant domains with most links to selected domain.
Domains with most semantic flow from rcsb.org
Relevant domains with most links from selected domain.
| domain | | | |
|---|---|---|---|
| http://qmul.ac.uk/ | 13 | 0.58 | qmul.ac.uk |
| http://ensembl.org/ | 26 | 0.41 | ensembl.org |
| http://genenames.org/ | 26 | 0.41 | genenames.org |
| http://uniprot.org/ | 27 | 0.41 | uniprot.org |
| http://pdb.org/ | 4 | 0.12 | pdb.org |
| http://wwpdb.org/ | 7 | 0.09 | wwpdb.org |
| http://nesg.org/ | 1 | 0.03 | nesg.org |
| http://sbkb.org/ | 2 | 0.03 | sbkb.org |
| http://uni-hamburg.de/ | 1 | 0.03 | uni-hamburg.de |
| http://psidev.info/ | 1 | 0.02 | psidev.info |
Most linked pages from rcsb.org
Pages from domain with most relevant inbound links.
| url | | | | | | | | | | | | | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| http://www.rcsb.org/pdb/results/results.do?startAt=0 | 1 | 0.15 | 0.86 | 0.02 | -1 | - | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/static.do?p=general_information/about_pdb/contact/job_listings.htm | 1 | 0.15 | 0.87 | 0.02 | -1 | no | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/secondary.do?p=v2/secondary/visualize.jsp | 1 | 0.15 | 0.86 | 0.02 | -1 | no | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/search/advSearch.do?search=new | 1 | 0.15 | 0.86 | 0.02 | -1 | - | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/chromosome.do | 1 | 0.15 | 0.79 | 0.02 | 0.51 | yes | 85 | 30 | 6 | 4 | 0 | 0 | |
| http://www.rcsb.org/pdb/static.do?p=help/mypdb.html | 1 | 0.15 | 0.71 | 0.02 | -1 | no | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/search/smartSubquery.do?smartSearchSubtype=HoldingsQuery&moleculeT | 1 | 0.15 | 0.49 | 0.02 | -1 | - | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/admin/viewLoadResults.do | 1 | 0.15 | 0.61 | 0.01 | -1 | - | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/mypdb/queryManager.do | 1 | 0.15 | 0.55 | 0.01 | -1 | - | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/home/home.do | 1 | 0.15 | 0.54 | 0.01 | 0.52 | yes | 129 | 42 | 6 | 3 | 1 | 1 |
Hubs from rcsb.org
Pages from domain with most likely on-topic outgoing links.
| url | | | | | | | | | | | | | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| http://www.rcsb.org/pdb/home/home.do | 42 | 0.15 | 0.54 | 0.74 | 0.52 | yes | 129 | 42 | 6 | 3 | 1 | 1 | |
| http://www.rcsb.org/pdb/explore/jmol.do?structureId=4HHB&opt=3&bionumber=1 | 11 | 0.15 | 0.46 | 0.11 | -1 | no | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://pdb101.rcsb.org/browse | 10 | 0.15 | 0.87 | 0.4 | 0.99 | yes | 67 | 13 | 0 | 0 | 0 | 0 | |
| http://www.rcsb.org/pdb/secondary.do?p=v2/secondary/visualize.jsp | 10 | 0.15 | 0.86 | 0.08 | -1 | no | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/secondary.do?p=v2/secondary/search.jsp | 5 | 0.15 | 0.86 | 0.11 | 0.76 | yes | 109 | 39 | 5 | 3 | 0 | 0 | |
| http://www.rcsb.org/pdb/news.do?year=2017&article=5a3bf5f0e96b882cfa988f01 | 5 | 0.15 | 0.6 | 0.02 | -1 | no | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/secondary.do?p=v2/secondary/analyze.jsp | 3 | 0.15 | 0.85 | 0.02 | -1 | no | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/chromosome.do | 2 | 0.15 | 0.79 | 0.04 | 0.51 | yes | 85 | 30 | 6 | 4 | 0 | 0 | |
| http://www.rcsb.org/pdb/static.do?p=general_information/about_pdb/policies_references.html | 2 | 0.15 | 0.86 | 0 | -1 | no | -1 | -1 | -1 | -1 | 0 | 0 | |
| http://www.rcsb.org/pdb/static.do?p=general_information/about_pdb/contact/pdb_members.html | 1 | 0.15 | 0.85 | 0.03 | 0.94 | yes | 84 | 31 | 5 | 3 | 0 | 0 |
Similar domains to rcsb.org
Similar domains to domain, based on inbound linking patterns from other relevant domains. This is also known in SEO as topical co-citation.